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passing in this information as a command line argument provides a viable
alternative than simply running the software from the Batch Editor.
Listed below is a sample batch file. Note that the information contained
here matched the information required within the Batch Editor.
Note: There are options in the XML file below that are not accessible
through Batch Editor GUI. These options can be used by advanced users
through manual creation of the file.
<?xml version="1.0" encoding="UTF-8"?>
<Batch>
<Entry>
<Image>C:\ImaGene\Sample Data\1205\1205_g.TIF</Image>
<Image2>C:\ImaGene\Sample Data\1205\1205_r.TIF</Image2>
<Template>C:\ImaGene\Sample Data\1205\1205_new.gal</Template>
<Configuration>C:\ImaGene\Sample
Data\1205\1205_config_with_norm.xml</Configuration>
<Destination>C:\ImaGene\Sample
Data\1205\Out_batch_norm</Destination>
<Channel>0</Channel>
<ChannelName></ChannelName>
<Channel2>0</Channel2>
<ChannelName2></ChannelName2>
<SubstituteGridImage>null</SubstituteGridImage>
<SubstituteGridChannel>0</SubstituteGridChannel>
<AlignImages>true</AlignImages>
<AdjustGrid>true</AdjustGrid>
<AdjustSpots>true</AdjustSpots>
<Normalize>true</Normalize>
<Analyze>true</Analyze>
</Entry>
<Entry>
<Image>C:\ImaGene\Sample Data\1205\1205_r.TIF</Image>
<Template>C:\ImaGene\Sample Data\1205\1205_new.gal</Template>
<Configuration>C:\ImaGene\Sample
Data\1205\1205_config_with_norm.xml</Configuration>
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