Download QTXNetwork Manual

1 Introduction on QTX
QTXNetwork (Figure 1.1) is GPU-based computation software for linkage and
association analyses of epistasis and environment interaction of complex traits. It contains
four functional modules (Figure 1.2): quantitative trait locus (QTL) for linkage analysis,
quantitative trait SNP (QTS) for genome-wide association analysis, quantitative trait
transcript/protein/metabolite (QTT/P/M) for transcriptome/proteome/metabolome association
analysis, and GMDR for data filtering which will be further used in Genome-Wide
Association Studies (GWAS). By using the massive parallel nature of multi-GPUs, this
mapping tool can perform association analyses on large-scale omics data for complex traits.
Fig 1.1: The main window of the QTXNetwork
Fig 1.2: The popup window for creating new project for QTL, QTS, QTT/P/M or GMDR
1