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Table of Contents Table of Contents ....................................................................................................................................................... iii TOPO® Cloning Procedure for Experienced Users ................................................................................................ v Kit Contents and Storage .........................................................................................................................................vii Accessory Products .................................................................................................................................................... x Introduction ....................................................................................................................... 1 Overview...................................................................................................................................................................... 1 How Directional TOPO® Cloning Works ................................................................................................................ 3 Experimental Outline ................................................................................................................................................. 4 Methods.............................................................................................................................. 5 Designing PCR Primers ............................................................................................................................................. 5 Producing Blunt-End PCR Products ...................................................................................................................... 10 Setting Up the TOPO® Cloning Reaction............................................................................................................... 11 Transforming One Shot® Competent E. coli .......................................................................................................... 13 Analyzing Transformants........................................................................................................................................ 16 Guidelines to Perform the LR Recombination Reaction...................................................................................... 18 Guidelines to Perform TEV Cleavage of Recombinant Proteins ........................................................................ 20 Troubleshooting .............................................................................................................. 21 Appendix .......................................................................................................................... 23 Performing the Control Reactions .......................................................................................................................... 23 Gel Purifying PCR Products.................................................................................................................................... 26 Map and Features of pENTR™/D-TOPO®............................................................................................................. 28 Map and Features of pENTR™/SD/D-TOPO® ..................................................................................................... 30 Map and Features of pENTR™/TEV/D-TOPO® .................................................................................................. 32 Recipes........................................................................................................................................................................ 34 Technical Service....................................................................................................................................................... 35 Purchaser Notification ............................................................................................................................................. 36 Gateway® Clone Distribution Policy...................................................................................................................... 38 Product Qualification ............................................................................................................................................... 39 References .................................................................................................................................................................. 40 iii