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Chapter 9: Other Jaguar Files Jaguar User’s Guide CALCULATION TYPE 01 (with any comment allowed after this string), indicating that the information following that line is for HF, DFT, or GVB wavefunctions. After all the information in the file for these calculations, the file should contain this line: CALCULATION TYPE 02 followed by information for LMP2 wavefunctions. Describing Bonding Types in the Lewis File The bonding type information for HF, DFT, or GVB wavefunctions should follow the first line describing the calculation type. The first line of this information should begin BONDING TYPE 01 and the rest of the bonding type information should not contain any blank lines except the last line, which signals the end of bonding type information. Bonding type information should be listed for each relevant element in turn. The information for the first atom should follow immediately after the “BONDING TYPE 01” label. The first character of the information for that atom should begin with the atom’s atomic number. The following lines should describe up to five “groups” of bonds for that atom. Each group must begin with the word Group (with no preceding spaces) and must contain information for bonds of bond orders 1, 2, and 3, with a comment line identifying each bond order. The group is simply a list of bonded atoms and bond orders for the element being described—for instance, Group 2 for carbon could describe C=C and C=O bonds by specifying that for bond order 2, Group 2 contains two elements with atom numbers 6 and 8. The first line under each bond order label must list the number of elements for that bond order and that group (2 for the C=C and C=O example); if this number is 0, the next line must list the atomic numbers for those elements (6 and 8 in the example). Here is the beginning of a sample .lewis file illustrating a list of bonding type information for carbon, including some comments to further explain the file format: Section 9.6: The Lewis File 257
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