Download EMBOSS user's guide : practical bioinformatics

Contents
Acknowledgements
Preface
page
XVI
XIX
Conventions
XXII
Welcome to the EMBOSS User's Guide
Summary
Chapter 1.
Chapter 2.
Chapter 3.
Chapter 4.
xxv
XXV
Background
to
EMBOSS
XXV
Basic setup and maintenance
Getting
started
Tutorial
XXV
XXV
XXV
Chapter
5. File formats
Chapter
6. The EMBOSS command line
Chapter
Chapter
7. Interfaces
XXV
XXVI
XXVI
8. Using EMBOSS under wEMBOSS
XXVI
Chapter 9. Using EMBOSS under Jemboss xxvi
Appendix A. File format reference XXVI
Appendix B. Application reference XXVII
Appendix C. Command-line qualifier reference XXVII
Appendix D. Resources XXVH
1
Background
1.1
History
1.2
EMBOSS
1.3
Key features
to EMBOSS
developers
General features
1.3.2
Features for
2.1
2.2
2.3
2
3
1.3.1
2
3
users
of EMBOSS
Basic setup and maintenance
Supported platforms 7
Hardware requirements
8
Software requirements
8
2.3.1
GNU tools
2.3.2
EMBOSS dependencies
2.3.3
EMBASSY
2.4
2.4.1
2.4.2
i
I
5
7
8
dependencies
Software releases
9
Stable releases
9
8
8
2.5.2
Developer's (CVS) release 11
Downloading the stable release 11
Downloading via the EMBOSS website
Downloading via anonymous FTP 12
2.6
Package
2.5
2.5.1
structure
11
14
V