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3 User Interface
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Navigating the 3D World
Mouse actions available in the 3D world:
Function
Action
Zoom
By pressing both mouse buttons and
moving up and down.
By using scroll wheel.
By using shift and left mouse button.
Free Rotation
Dragging mouse cursor while holding left
mouse button down.
Drag Atom Rotation
While holding mouse over an atom:
Dragging mouse (left mouse button
down) will force the atom to follow the
mouse cursor.
Free Translation
Dragging mouse cursor while holding
right mouse button down.
Show Context Menu
Click and release right mouse button.
All rotations are centered about the rotational center.
This center can be chosen by invoking the context menu on an atom (right
mouse button click) and selecting Set as Rotational Center. Another option
is to choose Fit to Screen from the Workspace Explorer context menu. Fit
to Screen will set the rotational center to the center of the bounding box
enclosing the chosen molecule. If Fit to Screen is invoked from the MVD
Toolbar or from the Visualization Window context menu, the new rotational
center will be the center of the bounding box enclosing all visible molecules in
the Visualization Window.
Manipulating Visualization Objects
All objects in the 3D world have context menu actions. These can be used for
changing their properties, e.g. setting hybridization, partial charge, implicit
hydrogens, or hydrogen bond types for atoms and bond order or bond
flexibility for bonds. See Section 4.3 for more details.
3.6 Console Window
The Console Window (at the bottom of the screen) displays information,
warnings and errors. The input field at the bottom of the console window
molegro virtual docker – user manual