Download ENViz - Agilent Technologies

Transcript
ENViz follows an enrichment analysis approach, driven by three input matrices.
ENViz input consists of primary data matrix (e.g. a set of genes with expression
measured across a set of samples), pivot data matrix (e.g. a set of miRNAs with
expression measured in the same set of samples), and primary data annotation
matrix (e.g. pathway or GO annotation of genes).
Note that in the figure above, the boxes representing the various input matrices are
drawn to their relative dimensions. Consider the case where:
N = number of biological entities, such as genes, in the Primary Data Matrix
M = number of biological entities, such as miRNAs, in the Pivot Data Matrix
A = number of annotation entries, such as pathways or GO terms, in the Annotation
Matrix,
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Tutorial: ENViz