Download BigDataBench Simulator Version

Handbook of BigDataBench 3.1
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mpic++ BP.cpp deep.o -o BP
To run
mpirun -n <process >./BP
Bioinformatics In Bioinformatics domain,we have used data set including
:Genome sequence data and Assembly of the humangenome.The Genome sequence data is used by SAND workload.The Assembly of the humangenome is
used by BLAST workloads.// SAND
You can get it from http://ccl.cse.nd.edu/software/manuals/sand.html
BLAST
You can get it from http://www.mpiblast.org/Docs/Install
9.4
BigDataBench Simulator user manual
Workloads
Workload name
1 Hadoop-WordCount
2 Hadoop-Grep
3 Hadoop-NaiveBayes
4 Cloud-OLTP-Read
5 Hive-Differ
6 Hive-TPC-DS-query3
7 Spark-WordCount
8 Spark-Sort
9 Spark-Grep
10 Spark-Pagerank
11 Spark-Kmeans
12 Shark-Project
13 Shark-Orderby
14 Shark-TPC-DS-query8
15 Shark-TPC-DS-query10
16 Impala-Orderby
17 Impala-SelectQuery
Workloads running Users can use the following commands to drive the Simics
or Marss images. We use Simics as an example, you should replace the command“./simics -c . . . ” with “qemu/qemu-system-x86 64 . . . ” mentioned above
to use Marss.