Download PathwaysTM 4 Software User's Guide

Since each framework may provide a tool for importing microarray data into PathwaysTM, the
File menu may list multiple import options. The number of import options in the File menu
depends on the frameworks available with the PathwaysTM installation. For example, when only
the standard PathwaysTM framework is present, or when other frameworks that do not import
other file formats are present, the File menu lists a single import option, Import Image.
When an additional framework is present that supports the importing of other file formats, such
as a database, the Import Image option becomes a cascading menu with entries for all frameworks that support importing (the database framework is available as a reference implementation in source code format upon request).
Other features may depend on the type of framework. The detail viewer may not display
thumbnails with certain frameworks. Refer to Chapter 2 for more information about thumbnails. Additionally, the synthetic microarray view is unavailable if the framework does not provide geometry. Refer to Chapter 11 for more information about the synthetic view.
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