Download Exercise 1

Workshop on Bacterial Genomics
Type transport in the Keyword box (underlined red)
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Then select use the scroll bar to scroll down the GO term until you get to membrane and
then select it. Then click the submit query button (circled red).
Select rows per page to 100 from the drop down menu.
Then select use the scroll bar to scroll down the GO term until you get to membrane and
then select it. Then click the submit query button (circled red).
The query should return 74 results. Examine the results to see which proteins could be
hexose/glucose/monosaccharide transporters and whether PFB0210c is present. Then use
the browser back button to go back and submit the second and third queries. Note that the
results page tells you whether the protein has been manually or automatically annotated.
We’re now going to look at ways of treating the results sets that are obtained from our
Boolean searches. We can add, subtract and intersect different results sets using the
history page. We’ll also look at downloading the results sets.
21 Click on the History page link to bring up details of search results.
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