Download sliceOmatic 4.3 User`s Manual

Appendices
Sort the images. The images are sorted according to their “t” value. (“t” is the
direction of the slices’ acquisition. For axial slices, where the image is in the “x” “y” plane, “t” would be the “z” axis).
Admin: [t_ima] fill val
Change the pixel fill value associated to this image.
Admin: [t_ima] dim x y z
Change the dimensions of the images matching t_ima. The values of x, y and z
can be preceded by a + or - sign.
Admin: [t_ima] inc x y z
Change the pixel increment (distance between pixel centers) of the images
matching t_ima. The values of x, y and z can be preceded by a + or - sign.
Admin: [t_ima] org x y z
Change the origin of the images matching t_ima. The values of x, y and z can be
preceded by a + or - sign.
Note
For the dim, inc and org commands:
• If the "value" string contains a "+" sign, that value will be added to the image's
original value.
• If the "value" string contains a "-" sign, the value will be subtracted from the
image's original value.
• If the "value" string does not contain a sign, that value will replaced the
image's original value.
Filter: a_kern value
Fix the kernel size for the anisotropic filter.
Filter: a_grad value
Fix the gradient influence for the anisotropic filter.
Filter: a_conv value
Fix the convergence criteria for the anisotropic filter.
Filter: kernel size
Fix the kernel size for the convolution filters. The accepted values are 1, 3, 5...
31.
Filter: mix value
266