Download JoinMap 4 Manual

Contents
Introduction 1
Installation 2
How to cite JoinMap 4 ? 2
Acknowledgement 2
Getting started 3
Using JoinMap 13
General 13
Keyboard shortcuts 13
Tables 14
Printing and exporting 14
Special selection of nodes in tree views 14
Various 15
JoinMap project 15
Dataset node 16
Population node 17
Grouping test statistics 18
Pairwise data population node 19
Creating groups for mapping 19
Grouping node 19
Group node 21
Pairwise data population group node 22
Map integration 22
Mapping node and mapping algorithms 23
Regression mapping algorithm 23
Maximum likelihood mapping algorithm 25
Map node 27
Plain map 27
Regression algorithm map 28
ML algorithm map 29
Chart node 30
Final remarks 30
Tutorial 31
Data files 45
General 45
Data file characteristics 45
Locus genotype file 46
Pairwise data file 51
Map file 53
Default file name extensions 53
Lists and references 55
List of tables 55
List of figures 55
List of examples 55
References 55
Web references 56
Index 57