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Chapter 3: Building a Model System Figure 3.6. The 2qdz model system with waters undisplayed. 24. Click Start. The job is started, and the Monitor panel is displayed. When the job finishes, a new entry group is added to the Project Table, labeled 2qdz_setup-out1. It contains only a single entry, which includes the entire model system. 25. Close the System Builder panel and the Monitor panel. Desmond 2.2 Quick Start Guide 15
