Download Client User`s Manual

RECOG Client User's Manual
33.4. Similar phylogenetic pattern search
1.
To display the Calculate distance by pattern screen, select a profile in Phylogenetic
Pattern on the control panel, click the right mouse button, and click Calculate distance
by pattern.
2.
On the Calculate distance by pattern screen, specify the conditions for determining the
pattern similarity.
 Name column, Save column
To save the calculation results to a file, check the Save column and enter the name. If
the calculation results are saved to a file, they can be used even if the DomClust result
file is reloaded.
 Profile column
Specify the profile type.

Phylogenetic pattern
Use as a profile the binary vector representing the occurrence pattern of species
(expressing the presence or absence of species as 0 or 1, respectively).
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