Download Mandatory qualifiers

Transcript
width a 10 characters is nearly unreadable. If the width is set to less than 4, the graphics lines and
the scale line will not be displayed.
-collapse (boolean)
If set, features from the same source and of the same type and sense are all printed on the same line.
For instance, if there are several features from the EMBL feature table (ie. the same source) which are
all of the type "exon" in the same sense, they will all be displayed on the same line. This makes it
hard to distinguish overlapping features. If this is set to false, each feature is displayed on a separate
line. This makes it easier to distinguish where features start and end.
-[no]forward (boolean)
Set this to false if you do not want to display forward sense features.
-[no]reverse (boolean)
Set this to false if you do not want to display reverse sense features.
-[no]unknown (boolean)
Set this to false if you do not want to display unknown sense features. For example, features with no
directionality (all protein features are of this type) and some nucleic features (such as CG-rich
regions).
-strand (boolean)
Set this if you want to display the strand of the features. Protein features are always directionless
(indicated by 0), forward is indicated by +, and reverse is -.
-source (boolean)
Set this if you want to display the source of the features. The source name is usually either the name
of the program that detected the feature or it is the name of the feature table (e.g., EMBL) that the
feature came from.
-position (boolean)
Set this if you want to display the start and end position of the features. If several features are being
displayed on the same line, the start and end positions will be joined by a comma. For example: 189189,225-225.
-[no]type (boolean)
Set this to false if you do not want to display the type of the features.
-tags (boolean)
Set this to false if you do not want to display the tags and values of the features.
-[no]values (boolean)
Set this to false if you do not want to display the tag values of the features. If this is set to false, only
the tag names are displayed. If the tags are not displayed, the values will not be displayed. Because
the value of the translation tag is often very long, it is never displayed.
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