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Download Mandatory qualifiers
Transcript
[ Team LiB ] interface interface reads coordinate files and writes files of inter-chain residue-residue contact data. Here is a sample session with interface: % interface Mandatory qualifiers: [-in] (infile) Name of protein coordinate file for input (EMBL format). -vdwf (string) Name of data file with Van der Waals radii. -thresh (float) Threshold contact distance. [-out] (outfile) Name of contact file for output. -conerrf (outfile) Name of log file for the build. Optional qualifiers: -ignore (float) If any two atoms from two different residues are at least this distance apart, no futher inter-atomic contacts are checked for for that residue pair. This speeds up the calculation considerably. [ Team LiB ]
